Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 MIR4281-201ENST00000580852 62 ntBASIC22.89■■□□□ 1.25
NDUFS3O75489 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.89■■□□□ 1.25
NDUFS3O75489 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
NDUFS3O75489 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NDUFS3O75489 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.89■■□□□ 1.25
NDUFS3O75489 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
NDUFS3O75489 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.88■■□□□ 1.25
NDUFS3O75489 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
NDUFS3O75489 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NDUFS3O75489 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
NDUFS3O75489 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.88■■□□□ 1.25
NDUFS3O75489 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
NDUFS3O75489 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
NDUFS3O75489 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
NDUFS3O75489 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
NDUFS3O75489 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
NDUFS3O75489 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
NDUFS3O75489 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
NDUFS3O75489 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.87■■□□□ 1.25
NDUFS3O75489 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
NDUFS3O75489 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NDUFS3O75489 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NDUFS3O75489 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NDUFS3O75489 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.86■■□□□ 1.25
NDUFS3O75489 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.86■■□□□ 1.25
NDUFS3O75489 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.86■■□□□ 1.25
NDUFS3O75489 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.86■■□□□ 1.25
NDUFS3O75489 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.86■■□□□ 1.25
NDUFS3O75489 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC22.86■■□□□ 1.25
NDUFS3O75489 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
NDUFS3O75489 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
NDUFS3O75489 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC22.86■■□□□ 1.25
NDUFS3O75489 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
NDUFS3O75489 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
NDUFS3O75489 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
NDUFS3O75489 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NDUFS3O75489 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NDUFS3O75489 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC22.85■■□□□ 1.25
NDUFS3O75489 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NDUFS3O75489 AC103724.3-201ENST00000564481 992 ntBASIC22.85■■□□□ 1.25
NDUFS3O75489 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
NDUFS3O75489 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NDUFS3O75489 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
NDUFS3O75489 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NDUFS3O75489 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
NDUFS3O75489 STK32C-205ENST00000456004 607 ntTSL 2 BASIC22.84■■□□□ 1.25
NDUFS3O75489 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
NDUFS3O75489 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
NDUFS3O75489 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
NDUFS3O75489 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
NDUFS3O75489 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.25
NDUFS3O75489 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.83■■□□□ 1.25
NDUFS3O75489 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.83■■□□□ 1.25
NDUFS3O75489 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
NDUFS3O75489 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.82■■□□□ 1.24
NDUFS3O75489 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
NDUFS3O75489 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
NDUFS3O75489 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.82■■□□□ 1.24
NDUFS3O75489 AF131216.4-201ENST00000638924 1588 ntBASIC22.82■■□□□ 1.24
NDUFS3O75489 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NDUFS3O75489 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC22.82■■□□□ 1.24
NDUFS3O75489 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NDUFS3O75489 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
NDUFS3O75489 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NDUFS3O75489 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
NDUFS3O75489 AC131274.2-201ENST00000580697 1507 ntBASIC22.82■■□□□ 1.24
NDUFS3O75489 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC22.81■■□□□ 1.24
NDUFS3O75489 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
NDUFS3O75489 AL031848.2-201ENST00000607670 837 ntBASIC22.81■■□□□ 1.24
NDUFS3O75489 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC22.81■■□□□ 1.24
NDUFS3O75489 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NDUFS3O75489 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.81■■□□□ 1.24
NDUFS3O75489 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
NDUFS3O75489 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NDUFS3O75489 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
NDUFS3O75489 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NDUFS3O75489 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.8■■□□□ 1.24
NDUFS3O75489 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NDUFS3O75489 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
NDUFS3O75489 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
NDUFS3O75489 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.79■■□□□ 1.24
NDUFS3O75489 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NDUFS3O75489 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NDUFS3O75489 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
NDUFS3O75489 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.79■■□□□ 1.24
NDUFS3O75489 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.78■■□□□ 1.24
NDUFS3O75489 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFS3O75489 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.77■■□□□ 1.24
NDUFS3O75489 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
NDUFS3O75489 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms