Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
PLOD3O60568 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
PLOD3O60568 AL161729.1-201ENST00000604104 1402 ntBASIC21.58■■□□□ 1.05
PLOD3O60568 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
PLOD3O60568 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.58■■□□□ 1.05
PLOD3O60568 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
PLOD3O60568 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PLOD3O60568 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
PLOD3O60568 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
PLOD3O60568 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
PLOD3O60568 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PLOD3O60568 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
PLOD3O60568 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
PLOD3O60568 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.56■■□□□ 1.04
PLOD3O60568 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.56■■□□□ 1.04
PLOD3O60568 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.56■■□□□ 1.04
PLOD3O60568 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.56■■□□□ 1.04
PLOD3O60568 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
PLOD3O60568 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.56■■□□□ 1.04
PLOD3O60568 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PLOD3O60568 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.56■■□□□ 1.04
PLOD3O60568 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.56■■□□□ 1.04
PLOD3O60568 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PLOD3O60568 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
PLOD3O60568 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.55■■□□□ 1.04
PLOD3O60568 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
PLOD3O60568 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PLOD3O60568 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.55■■□□□ 1.04
PLOD3O60568 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PLOD3O60568 AC004812.2-201ENST00000611079 2094 ntBASIC21.54■■□□□ 1.04
PLOD3O60568 AF131216.4-201ENST00000638924 1588 ntBASIC21.54■■□□□ 1.04
PLOD3O60568 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PLOD3O60568 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.54■■□□□ 1.04
PLOD3O60568 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.54■■□□□ 1.04
PLOD3O60568 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
PLOD3O60568 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PLOD3O60568 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PLOD3O60568 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PLOD3O60568 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.54■■□□□ 1.04
PLOD3O60568 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLOD3O60568 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLOD3O60568 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PLOD3O60568 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLOD3O60568 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.53■■□□□ 1.04
PLOD3O60568 AL031848.2-201ENST00000607670 837 ntBASIC21.53■■□□□ 1.04
PLOD3O60568 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.53■■□□□ 1.04
PLOD3O60568 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PLOD3O60568 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLOD3O60568 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PLOD3O60568 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PLOD3O60568 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.52■■□□□ 1.04
PLOD3O60568 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PLOD3O60568 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.52■■□□□ 1.04
PLOD3O60568 AL022069.1-201ENST00000568025 1636 ntBASIC21.52■■□□□ 1.04
PLOD3O60568 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PLOD3O60568 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.52■■□□□ 1.04
PLOD3O60568 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.52■■□□□ 1.04
PLOD3O60568 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.52■■□□□ 1.04
PLOD3O60568 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PLOD3O60568 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
PLOD3O60568 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PLOD3O60568 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.04
PLOD3O60568 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
PLOD3O60568 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.51■■□□□ 1.03
PLOD3O60568 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.51■■□□□ 1.03
PLOD3O60568 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
PLOD3O60568 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
PLOD3O60568 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
PLOD3O60568 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PLOD3O60568 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PLOD3O60568 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PLOD3O60568 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
PLOD3O60568 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.5■■□□□ 1.03
PLOD3O60568 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PLOD3O60568 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.49■■□□□ 1.03
PLOD3O60568 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PLOD3O60568 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PLOD3O60568 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.49■■□□□ 1.03
PLOD3O60568 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PLOD3O60568 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PLOD3O60568 AC131274.2-201ENST00000580697 1507 ntBASIC21.49■■□□□ 1.03
PLOD3O60568 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PLOD3O60568 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PLOD3O60568 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PLOD3O60568 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PLOD3O60568 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PLOD3O60568 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PLOD3O60568 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PLOD3O60568 AC137630.3-201ENST00000607245 391 ntBASIC21.48■■□□□ 1.03
PLOD3O60568 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PLOD3O60568 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PLOD3O60568 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms