Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
URB1O60287 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
URB1O60287 AC142472.1-201ENST00000612013 1741 ntBASIC21.78■■□□□ 1.08
URB1O60287 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.78■■□□□ 1.08
URB1O60287 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
URB1O60287 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.77■■□□□ 1.08
URB1O60287 AC090877.2-201ENST00000558441 1738 ntBASIC21.77■■□□□ 1.08
URB1O60287 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
URB1O60287 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC21.77■■□□□ 1.08
URB1O60287 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
URB1O60287 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.76■■□□□ 1.07
URB1O60287 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
URB1O60287 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
URB1O60287 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC21.76■■□□□ 1.07
URB1O60287 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.76■■□□□ 1.07
URB1O60287 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
URB1O60287 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
URB1O60287 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
URB1O60287 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC21.76■■□□□ 1.07
URB1O60287 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.76■■□□□ 1.07
URB1O60287 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.76■■□□□ 1.07
URB1O60287 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 AC233992.3-201ENST00000607491 485 ntBASIC21.75■■□□□ 1.07
URB1O60287 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.75■■□□□ 1.07
URB1O60287 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
URB1O60287 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
URB1O60287 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.74■■□□□ 1.07
URB1O60287 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.74■■□□□ 1.07
URB1O60287 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.74■■□□□ 1.07
URB1O60287 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
URB1O60287 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
URB1O60287 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC21.74■■□□□ 1.07
URB1O60287 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
URB1O60287 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
URB1O60287 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
URB1O60287 YBX1P1-201ENST00000445822 960 ntBASIC21.73■■□□□ 1.07
URB1O60287 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.73■■□□□ 1.07
URB1O60287 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC21.73■■□□□ 1.07
URB1O60287 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
URB1O60287 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.73■■□□□ 1.07
URB1O60287 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
URB1O60287 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
URB1O60287 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.72■■□□□ 1.07
URB1O60287 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.72■■□□□ 1.07
URB1O60287 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.72■■□□□ 1.07
URB1O60287 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
URB1O60287 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
URB1O60287 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
URB1O60287 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
URB1O60287 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.72■■□□□ 1.07
URB1O60287 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
URB1O60287 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.72■■□□□ 1.07
URB1O60287 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC21.71■■□□□ 1.07
URB1O60287 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
URB1O60287 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.71■■□□□ 1.07
URB1O60287 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
URB1O60287 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
URB1O60287 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
URB1O60287 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
URB1O60287 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
URB1O60287 BX842568.3-201ENST00000418104 571 ntBASIC21.71■■□□□ 1.07
URB1O60287 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
URB1O60287 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.7■■□□□ 1.06
URB1O60287 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
URB1O60287 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
URB1O60287 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
URB1O60287 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.69■■□□□ 1.06
URB1O60287 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.69■■□□□ 1.06
URB1O60287 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC21.69■■□□□ 1.06
URB1O60287 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
URB1O60287 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
URB1O60287 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
URB1O60287 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.68■■□□□ 1.06
URB1O60287 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.68■■□□□ 1.06
URB1O60287 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.68■■□□□ 1.06
URB1O60287 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
URB1O60287 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
URB1O60287 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
URB1O60287 AC123595.1-201ENST00000440769 1046 ntBASIC21.68■■□□□ 1.06
URB1O60287 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.68■■□□□ 1.06
URB1O60287 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
URB1O60287 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
URB1O60287 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
URB1O60287 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.68■■□□□ 1.06
URB1O60287 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.68■■□□□ 1.06
URB1O60287 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
URB1O60287 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
URB1O60287 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.67■■□□□ 1.06
URB1O60287 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms