Protein–RNA interactions for Protein: O00358

FOXE1, Forkhead box protein E1, humanhuman

Predicted RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXE1O00358 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXE1O00358 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
FOXE1O00358 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.99■■□□□ 1.11
FOXE1O00358 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXE1O00358 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXE1O00358 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.99■■□□□ 1.11
FOXE1O00358 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXE1O00358 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.99■■□□□ 1.11
FOXE1O00358 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
FOXE1O00358 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXE1O00358 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXE1O00358 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXE1O00358 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
FOXE1O00358 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXE1O00358 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXE1O00358 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
FOXE1O00358 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.98■■□□□ 1.11
FOXE1O00358 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.98■■□□□ 1.11
FOXE1O00358 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
FOXE1O00358 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.98■■□□□ 1.11
FOXE1O00358 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXE1O00358 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXE1O00358 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXE1O00358 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXE1O00358 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXE1O00358 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXE1O00358 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.97■■□□□ 1.11
FOXE1O00358 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
FOXE1O00358 AC103724.3-201ENST00000564481 992 ntBASIC21.97■■□□□ 1.11
FOXE1O00358 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.97■■□□□ 1.11
FOXE1O00358 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
FOXE1O00358 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
FOXE1O00358 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
FOXE1O00358 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.96■■□□□ 1.11
FOXE1O00358 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXE1O00358 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXE1O00358 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXE1O00358 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXE1O00358 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXE1O00358 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXE1O00358 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
FOXE1O00358 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXE1O00358 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXE1O00358 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXE1O00358 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXE1O00358 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
FOXE1O00358 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXE1O00358 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXE1O00358 KRT8P33-201ENST00000508125 1423 ntBASIC21.95■■□□□ 1.1
FOXE1O00358 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
FOXE1O00358 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
FOXE1O00358 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.94■■□□□ 1.1
FOXE1O00358 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
FOXE1O00358 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXE1O00358 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXE1O00358 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.93■■□□□ 1.1
FOXE1O00358 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.93■■□□□ 1.1
FOXE1O00358 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXE1O00358 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXE1O00358 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.93■■□□□ 1.1
FOXE1O00358 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
FOXE1O00358 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
FOXE1O00358 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXE1O00358 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXE1O00358 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXE1O00358 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXE1O00358 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
FOXE1O00358 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
FOXE1O00358 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
FOXE1O00358 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
FOXE1O00358 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
FOXE1O00358 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.91■■□□□ 1.1
FOXE1O00358 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.91■■□□□ 1.1
FOXE1O00358 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.91■■□□□ 1.1
FOXE1O00358 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.91■■□□□ 1.1
FOXE1O00358 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.91■■□□□ 1.1
FOXE1O00358 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXE1O00358 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXE1O00358 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
FOXE1O00358 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXE1O00358 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.9■■□□□ 1.1
FOXE1O00358 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXE1O00358 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
FOXE1O00358 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXE1O00358 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXE1O00358 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXE1O00358 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXE1O00358 ALDH1A3-203ENST00000557963 1670 ntBASIC21.9■■□□□ 1.1
FOXE1O00358 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXE1O00358 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXE1O00358 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXE1O00358 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
FOXE1O00358 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
FOXE1O00358 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
FOXE1O00358 AC004448.1-201ENST00000458332 883 ntBASIC21.89■■□□□ 1.09
FOXE1O00358 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
FOXE1O00358 AL031848.2-201ENST00000607670 837 ntBASIC21.89■■□□□ 1.09
FOXE1O00358 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
FOXE1O00358 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.89■■□□□ 1.09
FOXE1O00358 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms