Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPIPB4C9JG80 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
NPIPB4C9JG80 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPIPB4C9JG80 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.44■□□□□ 0.86
NPIPB4C9JG80 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 AC103834.1-201ENST00000520383 144 ntBASIC20.43■□□□□ 0.86
NPIPB4C9JG80 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
NPIPB4C9JG80 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
NPIPB4C9JG80 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
NPIPB4C9JG80 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 YBX1P4-201ENST00000392794 808 ntBASIC20.4■□□□□ 0.86
NPIPB4C9JG80 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
NPIPB4C9JG80 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
NPIPB4C9JG80 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.39■□□□□ 0.86
NPIPB4C9JG80 ALDH1A3-203ENST00000557963 1670 ntBASIC20.39■□□□□ 0.86
NPIPB4C9JG80 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPB4C9JG80 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.39■□□□□ 0.85
NPIPB4C9JG80 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.39■□□□□ 0.85
NPIPB4C9JG80 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
NPIPB4C9JG80 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPB4C9JG80 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.39■□□□□ 0.85
NPIPB4C9JG80 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPB4C9JG80 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
NPIPB4C9JG80 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 AC004448.1-201ENST00000458332 883 ntBASIC20.38■□□□□ 0.85
NPIPB4C9JG80 AC103724.3-201ENST00000564481 992 ntBASIC20.38■□□□□ 0.85
NPIPB4C9JG80 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
NPIPB4C9JG80 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPB4C9JG80 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPB4C9JG80 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.37■□□□□ 0.85
NPIPB4C9JG80 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
NPIPB4C9JG80 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPB4C9JG80 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.37■□□□□ 0.85
NPIPB4C9JG80 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
NPIPB4C9JG80 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPB4C9JG80 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPB4C9JG80 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms