Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDHR4A6H8M9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDHR4A6H8M9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDHR4A6H8M9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDHR4A6H8M9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR4A6H8M9 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR4A6H8M9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.13■□□□□ 0.97
CDHR4A6H8M9 AC120024.1-201ENST00000562672 995 ntBASIC21.13■□□□□ 0.97
CDHR4A6H8M9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDHR4A6H8M9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR4A6H8M9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDHR4A6H8M9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDHR4A6H8M9 AL022069.1-201ENST00000568025 1636 ntBASIC21.12■□□□□ 0.97
CDHR4A6H8M9 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR4A6H8M9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.12■□□□□ 0.97
CDHR4A6H8M9 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.12■□□□□ 0.97
CDHR4A6H8M9 AL033527.3-201ENST00000566366 1196 ntBASIC21.12■□□□□ 0.97
CDHR4A6H8M9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDHR4A6H8M9 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDHR4A6H8M9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 KRT18P24-201ENST00000344739 1156 ntBASIC21.11■□□□□ 0.97
CDHR4A6H8M9 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDHR4A6H8M9 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CDHR4A6H8M9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 AC131274.2-201ENST00000580697 1507 ntBASIC21.09■□□□□ 0.97
CDHR4A6H8M9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDHR4A6H8M9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR4A6H8M9 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.08■□□□□ 0.97
CDHR4A6H8M9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.08■□□□□ 0.97
CDHR4A6H8M9 THA1P-201ENST00000590384 1145 ntBASIC21.08■□□□□ 0.97
CDHR4A6H8M9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
CDHR4A6H8M9 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDHR4A6H8M9 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CDHR4A6H8M9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 MIR4508-201ENST00000584178 70 ntBASIC21.07■□□□□ 0.96
CDHR4A6H8M9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.07■□□□□ 0.96
CDHR4A6H8M9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR4A6H8M9 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR4A6H8M9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.06■□□□□ 0.96
CDHR4A6H8M9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.06■□□□□ 0.96
CDHR4A6H8M9 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.06■□□□□ 0.96
CDHR4A6H8M9 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CDHR4A6H8M9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CDHR4A6H8M9 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR4A6H8M9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.05■□□□□ 0.96
CDHR4A6H8M9 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR4A6H8M9 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.05■□□□□ 0.96
CDHR4A6H8M9 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CDHR4A6H8M9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms