Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 FOXO3B-201ENST00000395675 1928 ntBASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRDV1A0A1B0GX56 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRDV1A0A1B0GX56 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRDV1A0A1B0GX56 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRDV1A0A1B0GX56 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRDV1A0A1B0GX56 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRDV1A0A1B0GX56 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRDV1A0A1B0GX56 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRDV1A0A1B0GX56 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRDV1A0A1B0GX56 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRDV1A0A1B0GX56 AL157400.5-201ENST00000507624 621 ntBASIC20.2■□□□□ 0.82
TRDV1A0A1B0GX56 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRDV1A0A1B0GX56 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRDV1A0A1B0GX56 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.2■□□□□ 0.82
TRDV1A0A1B0GX56 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRDV1A0A1B0GX56 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRDV1A0A1B0GX56 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.17■□□□□ 0.82
TRDV1A0A1B0GX56 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms