Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 AC007029.1-201ENST00000604183 313 ntBASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV5A0A0B4J249 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV5A0A0B4J249 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 CEP120-209ENST00000515110 606 ntTSL 3 BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 AL117328.2-201ENST00000624617 1940 ntBASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV5A0A0B4J249 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 RAP2CP1-202ENST00000605179 643 ntBASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 CLDN5-201ENST00000403084 2357 ntBASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TRAV5A0A0B4J249 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 ANOS2P-203ENST00000472227 1816 ntBASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRAV5A0A0B4J249 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 AC233723.2-201ENST00000623798 2106 ntBASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 RPS2-202ENST00000526522 924 ntTSL 2 BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 AC026202.3-201ENST00000600805 1127 ntBASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 SRP68-213ENST00000629930 165 ntTSL 5 BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRAV5A0A0B4J249 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
TRAV5A0A0B4J249 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRAV5A0A0B4J249 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC17.77■□□□□ 0.43
TRAV5A0A0B4J249 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 KRT18P10-201ENST00000388836 1287 ntBASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 EP400NL-214ENST00000641289 2402 ntBASIC17.76■□□□□ 0.43
TRAV5A0A0B4J249 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV5A0A0B4J249 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV5A0A0B4J249 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV5A0A0B4J249 MIR639-201ENST00000384974 98 ntBASIC17.75■□□□□ 0.43
TRAV5A0A0B4J249 MIR7108-201ENST00000614319 87 ntBASIC17.75■□□□□ 0.43
TRAV5A0A0B4J249 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV5A0A0B4J249 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRAV5A0A0B4J249 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms