Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRGV5A0A0B4J1U4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRGV5A0A0B4J1U4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRGV5A0A0B4J1U4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TRGV5A0A0B4J1U4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.72■□□□□ 0.91
TRGV5A0A0B4J1U4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRGV5A0A0B4J1U4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TRGV5A0A0B4J1U4 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.7■□□□□ 0.9
TRGV5A0A0B4J1U4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV5A0A0B4J1U4 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV5A0A0B4J1U4 AC096631.2-201ENST00000436136 790 ntBASIC20.7■□□□□ 0.9
TRGV5A0A0B4J1U4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV5A0A0B4J1U4 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV5A0A0B4J1U4 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV5A0A0B4J1U4 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TRGV5A0A0B4J1U4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRGV5A0A0B4J1U4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.69■□□□□ 0.9
TRGV5A0A0B4J1U4 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRGV5A0A0B4J1U4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRGV5A0A0B4J1U4 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRGV5A0A0B4J1U4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRGV5A0A0B4J1U4 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 HLA-L-211ENST00000482052 1765 ntBASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 MIR638-201ENST00000385237 100 ntBASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 SRD5A1P1-201ENST00000442297 786 ntBASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRGV5A0A0B4J1U4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 AC110285.6-201ENST00000617652 491 ntBASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 AC022211.4-201ENST00000625094 2161 ntBASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.67■□□□□ 0.9
TRGV5A0A0B4J1U4 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 AL161729.1-201ENST00000604104 1402 ntBASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRGV5A0A0B4J1U4 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV5A0A0B4J1U4 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV5A0A0B4J1U4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV5A0A0B4J1U4 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV5A0A0B4J1U4 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRGV5A0A0B4J1U4 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
TRGV5A0A0B4J1U4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC20.65■□□□□ 0.9
TRGV5A0A0B4J1U4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.64■□□□□ 0.89
TRGV5A0A0B4J1U4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
TRGV5A0A0B4J1U4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TRGV5A0A0B4J1U4 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TRGV5A0A0B4J1U4 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 AP003733.4-201ENST00000623785 1697 ntBASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.63■□□□□ 0.89
TRGV5A0A0B4J1U4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRGV5A0A0B4J1U4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms