Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
TRBV6-7A0A0A0MS04 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV6-7A0A0A0MS04 STK25-234ENST00000535007 2459 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV6-7A0A0A0MS04 AC133552.2-201ENST00000619106 1032 ntBASIC19.23■□□□□ 0.67
TRBV6-7A0A0A0MS04 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRBV6-7A0A0A0MS04 AC233723.2-201ENST00000623798 2106 ntBASIC19.23■□□□□ 0.67
TRBV6-7A0A0A0MS04 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC19.23■□□□□ 0.67
TRBV6-7A0A0A0MS04 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.23■□□□□ 0.67
TRBV6-7A0A0A0MS04 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRBV6-7A0A0A0MS04 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRBV6-7A0A0A0MS04 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRBV6-7A0A0A0MS04 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.2■□□□□ 0.66
TRBV6-7A0A0A0MS04 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 MBP-237ENST00000579129 1052 ntTSL 5 BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRBV6-7A0A0A0MS04 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRBV6-7A0A0A0MS04 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 RPS2P7-201ENST00000447334 885 ntBASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRBV6-7A0A0A0MS04 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.16■□□□□ 0.66
TRBV6-7A0A0A0MS04 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRBV6-7A0A0A0MS04 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 254.5 ms