Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 CICP11-201ENST00000434745 2827 ntBASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 AC005840.4-201ENST00000541242 2494 ntBASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
HLA-DRB4X5D2U9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 CLK3P2-201ENST00000427566 1453 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 FAM207CP-201ENST00000443486 507 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 FAM86LP-201ENST00000478302 853 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC023310.3-201ENST00000557027 670 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC100756.1-201ENST00000562736 682 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC138749.3-201ENST00000567691 622 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC099568.2-201ENST00000609194 695 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC116165.1-201ENST00000611806 668 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC004790.1-201ENST00000612686 536 ntBASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
HLA-DRB4X5D2U9 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
HLA-DRB4X5D2U9 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC11.45□□□□□ -0.58
HLA-DRB4X5D2U9 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms