Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 SCARNA12-201ENST00000459155 270 ntBASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 AC068867.1-201ENST00000559855 150 ntBASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 AP000322.3-201ENST00000608665 388 ntBASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CDC42BPBQ9Y5S2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC108734.2-201ENST00000420887 1069 ntBASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 RN7SL530P-201ENST00000485097 298 ntBASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC073592.2-201ENST00000623062 780 ntBASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AC093909.3-201ENST00000504783 336 ntBASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 MIR4472-1-201ENST00000584349 80 ntBASIC22.09■■□□□ 1.13
CDC42BPBQ9Y5S2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 AC025183.3-201ENST00000623526 1482 ntBASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC22.08■■□□□ 1.13
CDC42BPBQ9Y5S2 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 NHP2-202ENST00000314397 599 ntTSL 2 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 AC095040.1-201ENST00000513286 675 ntBASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 PIGT-208ENST00000545755 1158 ntTSL 5 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 SIGLEC22P-201ENST00000599104 714 ntBASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 AC140113.1-201ENST00000603467 169 ntBASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CDC42BPBQ9Y5S2 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms