Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 MIR1909-201ENST00000411312 80 ntBASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AC134915.1-201ENST00000426461 574 ntBASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AC233724.13-201ENST00000598383 410 ntBASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 AC005252.3-201ENST00000623855 2258 ntBASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDHGB6Q9Y5F9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 RPS2P32-201ENST00000439199 892 ntBASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PCDHGB6Q9Y5F9 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms