Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC139749.1-202ENST00000617529 3139 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 REXO1L4P-201ENST00000605109 1937 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AL512638.1-201ENST00000457493 794 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC092183.1-201ENST00000469884 875 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC004890.2-204ENST00000481968 304 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC135586.1-201ENST00000539323 574 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC092337.1-201ENST00000568699 1129 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AL390955.2-201ENST00000603032 514 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC008738.7-201ENST00000609744 511 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC041040.2-201ENST00000622926 2899 ntBASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RHBDD3Q9Y3P4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 INTS4P1-203ENST00000641008 3683 ntBASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AC022144.1-201ENST00000602255 1580 ntBASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AL589987.1-201ENST00000453380 819 ntBASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 SPDYE18-201ENST00000510091 1050 ntBASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AC015656.1-201ENST00000624209 3578 ntBASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RHBDD3Q9Y3P4 AC138969.2-201ENST00000532739 9932 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms