Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AC019294.4-201ENST00000561777 2905 ntBASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AC104457.1-201ENST00000401024 814 ntBASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 UPK3BP1-201ENST00000428678 509 ntBASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 RNF146-204ENST00000476956 884 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 NT5C-211ENST00000582170 653 ntTSL 3 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AC105206.1-202ENST00000314927 2368 ntBASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 MAPT-IT1-201ENST00000624111 3016 ntBASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.43□□□□□ -0.42
RCL1Q9Y2P8 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AKAP8P1-201ENST00000434743 1349 ntBASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AC130686.1-201ENST00000622936 2466 ntBASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 RNA5SP415-201ENST00000517246 115 ntBASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AC112191.1-201ENST00000523689 701 ntBASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RCL1Q9Y2P8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms