Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 AL607033.1-201ENST00000623900 1599 ntBASIC14.91□□□□□ -0.02
SATB2Q9UPW6 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 ACKR1-201ENST00000368121 1240 ntBASIC14.91□□□□□ -0.02
SATB2Q9UPW6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 AC026410.3-201ENST00000514280 936 ntBASIC14.91□□□□□ -0.02
SATB2Q9UPW6 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 AP001258.2-201ENST00000529891 490 ntBASIC14.91□□□□□ -0.02
SATB2Q9UPW6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC14.91□□□□□ -0.02
SATB2Q9UPW6 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SATB2Q9UPW6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC138035.3-201ENST00000622706 2791 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC144831.1-201ENST00000573312 2656 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC104306.2-201ENST00000451877 341 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC025279.2-201ENST00000569730 653 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC093813.1-201ENST00000605066 256 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC107373.2-201ENST00000607735 490 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC126177.1-201ENST00000547829 2218 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 DRD5P1-201ENST00000456605 1438 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 PAUPAR-201ENST00000630360 2965 ntBASIC14.9□□□□□ -0.02
SATB2Q9UPW6 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.9□□□□□ -0.02
SATB2Q9UPW6 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms