Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AL138725.1-201ENST00000407347 1314 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 PDIA3P1-201ENST00000471856 1510 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 TLE1P1-201ENST00000422965 589 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AC007969.1-201ENST00000433675 447 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AP000812.2-201ENST00000538934 718 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AC078819.1-201ENST00000547454 765 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AC012085.1-201ENST00000548270 765 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 RAB43P1-201ENST00000561790 589 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AL512343.1-201ENST00000605837 169 ntBASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.22■□□□□ 0.35
PCDHA4Q9UN74 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 SALL4P5-201ENST00000419001 1760 ntBASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 RN7SKP230-201ENST00000365642 335 ntBASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 BOLA2P3-201ENST00000404566 256 ntBASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 CD8B2-202ENST00000417670 633 ntBASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 FTLP10-202ENST00000505798 471 ntBASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 WNT11-204ENST00000621122 789 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 AC138951.2-201ENST00000623455 1161 ntBASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHA4Q9UN74 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHA4Q9UN74 MTHFR-210ENST00000641407 2387 ntBASIC17.21■□□□□ 0.34
PCDHA4Q9UN74 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 AC106881.1-201ENST00000605849 3329 ntBASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHA4Q9UN74 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms