Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AP005019.2-201ENST00000615104 511 ntBASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 RPSAP52-203ENST00000622976 1023 ntBASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AC012508.2-201ENST00000567613 1472 ntBASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 AL359258.3-201ENST00000622910 2331 ntBASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.82■□□□□ 0.12
PPARGC1AQ9UBK2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 AL512384.1-201ENST00000406683 331 ntBASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 AC007389.4-201ENST00000454674 793 ntBASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 AC010319.3-201ENST00000597028 470 ntBASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PPARGC1AQ9UBK2 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 AL158070.2-201ENST00000623713 1621 ntBASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 WASH3P-207ENST00000560956 1394 ntBASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 AC114812.1-204ENST00000449669 728 ntBASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 GAPDHP21-201ENST00000450301 1010 ntBASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PPARGC1AQ9UBK2 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms