Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC012085.1-201ENST00000548270 765 ntBASIC14.44□□□□□ -0.1
CCDC88CQ9P219 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 TUBB1P2-201ENST00000422712 1306 ntBASIC14.44□□□□□ -0.1
CCDC88CQ9P219 TUBB1P1-201ENST00000503144 1300 ntBASIC14.44□□□□□ -0.1
CCDC88CQ9P219 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 AC007551.1-201ENST00000457394 519 ntBASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 AL606495.2-201ENST00000605867 535 ntBASIC14.44□□□□□ -0.1
CCDC88CQ9P219 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CCDC88CQ9P219 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 APOC3-202ENST00000375345 604 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 BOLA2P3-201ENST00000404566 256 ntBASIC14.43□□□□□ -0.1
CCDC88CQ9P219 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 EIF3FP3-201ENST00000434851 1086 ntBASIC14.43□□□□□ -0.1
CCDC88CQ9P219 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 AC099548.2-209ENST00000480264 625 ntBASIC14.43□□□□□ -0.1
CCDC88CQ9P219 GAPDHP40-201ENST00000505218 1006 ntBASIC14.43□□□□□ -0.1
CCDC88CQ9P219 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CCDC88CQ9P219 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CCDC88CQ9P219 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms