Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 AC040169.1-201ENST00000565382 521 ntBASIC16.91■□□□□ 0.3
CBX8Q9HC52 AL589739.1-201ENST00000607720 493 ntBASIC16.91■□□□□ 0.3
CBX8Q9HC52 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC16.91■□□□□ 0.3
CBX8Q9HC52 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CBX8Q9HC52 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 AL137783.1-201ENST00000623494 1896 ntBASIC16.9■□□□□ 0.3
CBX8Q9HC52 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 DGCR9-201ENST00000609630 2415 ntBASIC16.9■□□□□ 0.3
CBX8Q9HC52 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CBX8Q9HC52 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CBX8Q9HC52 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CBX8Q9HC52 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
CBX8Q9HC52 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CBX8Q9HC52 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CBX8Q9HC52 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
CBX8Q9HC52 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
CBX8Q9HC52 PTENP1-202ENST00000532280 3996 ntBASIC16.89■□□□□ 0.3
CBX8Q9HC52 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
CBX8Q9HC52 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 AC099521.3-201ENST00000624251 2938 ntBASIC16.89■□□□□ 0.29
CBX8Q9HC52 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 HLA-K-203ENST00000430151 1046 ntBASIC16.89■□□□□ 0.29
CBX8Q9HC52 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 TMEM198B-204ENST00000484016 896 ntBASIC16.89■□□□□ 0.29
CBX8Q9HC52 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CBX8Q9HC52 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.89■□□□□ 0.29
CBX8Q9HC52 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms