Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
BRF2Q9HAW0 OR2I1P-209ENST00000641730 5365 ntBASIC14.47□□□□□ -0.09
BRF2Q9HAW0 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 ACTBP8-201ENST00000403258 1108 ntBASIC14.46□□□□□ -0.09
BRF2Q9HAW0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 API5-211ENST00000534695 560 ntTSL 5 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 LINC02560-201ENST00000596379 459 ntBASIC14.46□□□□□ -0.09
BRF2Q9HAW0 CHCHD2P3-201ENST00000603038 451 ntBASIC14.46□□□□□ -0.09
BRF2Q9HAW0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 AC026748.1-201ENST00000624349 3251 ntBASIC14.46□□□□□ -0.09
BRF2Q9HAW0 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.46□□□□□ -0.09
BRF2Q9HAW0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
BRF2Q9HAW0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
BRF2Q9HAW0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
BRF2Q9HAW0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.46□□□□□ -0.1
BRF2Q9HAW0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AC055811.4-201ENST00000624039 1754 ntBASIC14.45□□□□□ -0.1
BRF2Q9HAW0 BX640514.1-201ENST00000583223 1918 ntBASIC14.45□□□□□ -0.1
BRF2Q9HAW0 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 PGGT1BP2-201ENST00000398621 1028 ntBASIC14.45□□□□□ -0.1
BRF2Q9HAW0 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AL162726.2-201ENST00000438986 1017 ntBASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AP001063.1-201ENST00000568332 529 ntBASIC14.45□□□□□ -0.1
BRF2Q9HAW0 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 AC005252.2-201ENST00000624630 1141 ntBASIC14.45□□□□□ -0.1
BRF2Q9HAW0 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
BRF2Q9HAW0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms