Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
TUBA1CQ9BQE3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.37□□□□□ -0.11
TUBA1CQ9BQE3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
TUBA1CQ9BQE3 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 AC004987.2-201ENST00000395959 1148 ntBASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 AL109936.8-201ENST00000641772 604 ntBASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 INTS4P1-203ENST00000641008 3683 ntBASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TUBA1CQ9BQE3 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 SLC6A6P1-201ENST00000413933 1850 ntBASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 ACE3P-201ENST00000423435 1973 ntBASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 FO393414.2-201ENST00000405153 598 ntBASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 HIST3H2BA-201ENST00000436555 524 ntBASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 AC114501.2-201ENST00000439631 535 ntBASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 GNAQP1-201ENST00000444815 1067 ntBASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 SPDYE18-201ENST00000510091 1050 ntBASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TUBA1CQ9BQE3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms