Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC19.38■□□□□ 0.69
ABCA3Q99758 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ABCA3Q99758 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ABCA3Q99758 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC19.38■□□□□ 0.69
ABCA3Q99758 AC090510.3-201ENST00000615831 821 ntBASIC19.38■□□□□ 0.69
ABCA3Q99758 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ABCA3Q99758 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ABCA3Q99758 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC19.38■□□□□ 0.69
ABCA3Q99758 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
ABCA3Q99758 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 AC107464.2-201ENST00000502923 569 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 IGHEP2-201ENST00000519308 1256 ntBASIC19.37■□□□□ 0.69
ABCA3Q99758 AC023968.2-201ENST00000560593 1049 ntBASIC19.37■□□□□ 0.69
ABCA3Q99758 AP005212.2-201ENST00000584979 510 ntBASIC19.37■□□□□ 0.69
ABCA3Q99758 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC19.37■□□□□ 0.69
ABCA3Q99758 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ABCA3Q99758 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 AC117503.4-201ENST00000623229 1418 ntBASIC19.37■□□□□ 0.69
ABCA3Q99758 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 TMEM14C-201ENST00000229563 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC19.37■□□□□ 0.69
ABCA3Q99758 BRI3P1-201ENST00000440440 378 ntBASIC19.37■□□□□ 0.69
ABCA3Q99758 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 BPIFB5P-201ENST00000457066 1099 ntBASIC19.37■□□□□ 0.69
ABCA3Q99758 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ABCA3Q99758 AC025186.1-201ENST00000478174 870 ntBASIC19.37■□□□□ 0.69
ABCA3Q99758 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC19.37■□□□□ 0.69
ABCA3Q99758 C11orf97-201ENST00000542198 701 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ABCA3Q99758 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC19.37■□□□□ 0.69
ABCA3Q99758 MIR6816-201ENST00000620368 66 ntBASIC19.37■□□□□ 0.69
ABCA3Q99758 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ABCA3Q99758 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 C18orf15-201ENST00000623680 2534 ntBASIC19.36■□□□□ 0.69
ABCA3Q99758 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC19.36■□□□□ 0.69
ABCA3Q99758 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
ABCA3Q99758 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 LINC01983-201ENST00000413586 574 ntTSL 2 BASIC19.36■□□□□ 0.69
ABCA3Q99758 AC063952.3-201ENST00000467756 308 ntBASIC19.36■□□□□ 0.69
ABCA3Q99758 GDNF-207ENST00000515058 764 ntTSL 5 BASIC19.36■□□□□ 0.69
ABCA3Q99758 KRT18P37-201ENST00000520711 1282 ntBASIC19.36■□□□□ 0.69
ABCA3Q99758 FOXN3-AS2-201ENST00000554071 1262 ntBASIC19.36■□□□□ 0.69
ABCA3Q99758 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC19.36■□□□□ 0.69
ABCA3Q99758 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.36■□□□□ 0.69
ABCA3Q99758 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ABCA3Q99758 WASH3P-207ENST00000560956 1394 ntBASIC19.36■□□□□ 0.69
ABCA3Q99758 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
ABCA3Q99758 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC19.35■□□□□ 0.69
ABCA3Q99758 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC19.35■□□□□ 0.69
ABCA3Q99758 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC19.35■□□□□ 0.69
ABCA3Q99758 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC19.35■□□□□ 0.69
ABCA3Q99758 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC19.35■□□□□ 0.69
ABCA3Q99758 NDUFB10P1-201ENST00000567319 521 ntBASIC19.35■□□□□ 0.69
ABCA3Q99758 AL591471.1-201ENST00000621855 229 ntBASIC19.35■□□□□ 0.69
ABCA3Q99758 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ABCA3Q99758 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms