Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 BTNL10-201ENST00000595971 695 ntBASIC12.7□□□□□ -0.38
CCL13Q99616 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL13Q99616 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 ACE3P-201ENST00000423435 1973 ntBASIC12.7□□□□□ -0.38
CCL13Q99616 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCL13Q99616 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL13Q99616 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL13Q99616 RER1-203ENST00000378513 3000 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL13Q99616 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL13Q99616 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCL13Q99616 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CCL13Q99616 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CCL13Q99616 MXI1-205ENST00000393134 889 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 ACTBP8-201ENST00000403258 1108 ntBASIC12.69□□□□□ -0.38
CCL13Q99616 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL13Q99616 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL13Q99616 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL13Q99616 USP32P1-208ENST00000506594 1164 ntBASIC12.69□□□□□ -0.38
CCL13Q99616 AC106760.1-201ENST00000508690 800 ntBASIC12.69□□□□□ -0.38
CCL13Q99616 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL13Q99616 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL13Q99616 AC233724.13-201ENST00000598383 410 ntBASIC12.69□□□□□ -0.38
CCL13Q99616 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 AC145423.3-201ENST00000615987 467 ntBASIC12.69□□□□□ -0.38
CCL13Q99616 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.69□□□□□ -0.38
CCL13Q99616 AC006058.4-201ENST00000624016 1670 ntBASIC12.69□□□□□ -0.38
CCL13Q99616 TPO-203ENST00000346956 2923 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL13Q99616 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCL13Q99616 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL13Q99616 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL13Q99616 AC018665.1-201ENST00000622927 1362 ntBASIC12.69□□□□□ -0.38
CCL13Q99616 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL13Q99616 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL13Q99616 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CCL13Q99616 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms