Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 CD7-202ENST00000578509 925 ntTSL 3 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 IFNL4P1-201ENST00000607083 540 ntBASIC11.54□□□□□ -0.56
AP1S3Q96PC3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
AP1S3Q96PC3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.53□□□□□ -0.56
AP1S3Q96PC3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 RAC2-202ENST00000401529 569 ntTSL 4 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 DDT-204ENST00000404092 805 ntTSL 3 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 VN2R19P-201ENST00000442399 1052 ntBASIC11.53□□□□□ -0.56
AP1S3Q96PC3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 NMU-203ENST00000507338 658 ntTSL 3 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 BMF-207ENST00000559701 630 ntTSL 3 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 FER1L5-206ENST00000624922 6367 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 AC007064.4-201ENST00000637740 555 ntBASIC11.53□□□□□ -0.56
AP1S3Q96PC3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 CHIC1-202ENST00000373504 6797 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
AP1S3Q96PC3 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.52□□□□□ -0.56
AP1S3Q96PC3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
AP1S3Q96PC3 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.52□□□□□ -0.56
AP1S3Q96PC3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
AP1S3Q96PC3 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
AP1S3Q96PC3 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.52□□□□□ -0.56
AP1S3Q96PC3 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
AP1S3Q96PC3 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms