Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
FGD4Q96M96 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC17.03■□□□□ 0.32
FGD4Q96M96 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.03■□□□□ 0.32
FGD4Q96M96 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 CMC1-204ENST00000423894 549 ntTSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 KLF2P1-201ENST00000447438 1042 ntBASIC17.03■□□□□ 0.32
FGD4Q96M96 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.03■□□□□ 0.32
FGD4Q96M96 OARD1-204ENST00000464633 717 ntTSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 RN7SL11P-201ENST00000471305 293 ntBASIC17.03■□□□□ 0.32
FGD4Q96M96 RN7SL720P-201ENST00000488178 304 ntBASIC17.03■□□□□ 0.32
FGD4Q96M96 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC17.03■□□□□ 0.32
FGD4Q96M96 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.03■□□□□ 0.32
FGD4Q96M96 AC245884.6-201ENST00000515672 1067 ntBASIC17.03■□□□□ 0.32
FGD4Q96M96 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.03■□□□□ 0.32
FGD4Q96M96 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.03■□□□□ 0.32
FGD4Q96M96 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
FGD4Q96M96 COG4-212ENST00000564653 590 ntTSL 5 BASIC17.03■□□□□ 0.32
FGD4Q96M96 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 SHC1P1-201ENST00000425230 1745 ntBASIC17.03■□□□□ 0.32
FGD4Q96M96 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.03■□□□□ 0.32
FGD4Q96M96 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.03■□□□□ 0.32
FGD4Q96M96 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
FGD4Q96M96 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.02■□□□□ 0.32
FGD4Q96M96 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.02■□□□□ 0.32
FGD4Q96M96 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.02■□□□□ 0.32
FGD4Q96M96 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC17.02■□□□□ 0.32
FGD4Q96M96 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.02■□□□□ 0.32
FGD4Q96M96 AC012508.2-201ENST00000567613 1472 ntBASIC17.02■□□□□ 0.32
FGD4Q96M96 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.02■□□□□ 0.32
FGD4Q96M96 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.02■□□□□ 0.32
FGD4Q96M96 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC17.02■□□□□ 0.32
FGD4Q96M96 TUBB8P8-201ENST00000458717 1058 ntBASIC17.02■□□□□ 0.32
FGD4Q96M96 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.02■□□□□ 0.32
FGD4Q96M96 MARK2P5-201ENST00000507649 634 ntBASIC17.02■□□□□ 0.32
FGD4Q96M96 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC17.02■□□□□ 0.32
FGD4Q96M96 AL160314.3-201ENST00000556041 767 ntBASIC17.02■□□□□ 0.32
FGD4Q96M96 FGFR3P5-201ENST00000564496 886 ntBASIC17.02■□□□□ 0.32
FGD4Q96M96 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.02■□□□□ 0.32
FGD4Q96M96 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.02■□□□□ 0.32
FGD4Q96M96 CU633904.3-201ENST00000624042 1029 ntBASIC17.02■□□□□ 0.32
FGD4Q96M96 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.02■□□□□ 0.32
FGD4Q96M96 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
FGD4Q96M96 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
FGD4Q96M96 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
FGD4Q96M96 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
FGD4Q96M96 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.02■□□□□ 0.31
FGD4Q96M96 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
FGD4Q96M96 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
FGD4Q96M96 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.02■□□□□ 0.31
FGD4Q96M96 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
FGD4Q96M96 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
FGD4Q96M96 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms