Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 ETV2-207ENST00000619399 994 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 AC244250.3-201ENST00000620749 366 ntBASIC17.37■□□□□ 0.37
CDCA5Q96FF9 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 MARK2P16-201ENST00000605714 1723 ntBASIC17.37■□□□□ 0.37
CDCA5Q96FF9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDCA5Q96FF9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 HNRNPA1P27-201ENST00000412087 955 ntBASIC17.36■□□□□ 0.37
CDCA5Q96FF9 OR2R1P-201ENST00000441404 914 ntBASIC17.36■□□□□ 0.37
CDCA5Q96FF9 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 NEU3-207ENST00000534628 746 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 AC011247.3-201ENST00000603297 438 ntBASIC17.36■□□□□ 0.37
CDCA5Q96FF9 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.36■□□□□ 0.37
CDCA5Q96FF9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 AC105250.1-201ENST00000509378 2057 ntBASIC17.36■□□□□ 0.37
CDCA5Q96FF9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.36■□□□□ 0.37
CDCA5Q96FF9 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 REXO1L2P-201ENST00000425429 2069 ntBASIC17.35■□□□□ 0.37
CDCA5Q96FF9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 AC023090.2-201ENST00000625182 2110 ntBASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 AC013726.1-201ENST00000563747 2285 ntBASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 AP001527.2-201ENST00000614441 631 ntBASIC17.35■□□□□ 0.37
CDCA5Q96FF9 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 AHCYP4-201ENST00000419201 1315 ntBASIC17.35■□□□□ 0.37
CDCA5Q96FF9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 USP4-203ENST00000415188 1454 ntTSL 3 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CDCA5Q96FF9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDCA5Q96FF9 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms