Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
TRIM11Q96F44 SBF1P1-201ENST00000444527 5631 ntBASIC16.03■□□□□ 0.16
TRIM11Q96F44 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TRIM11Q96F44 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 SOCS2P1-201ENST00000417727 557 ntBASIC16.02■□□□□ 0.16
TRIM11Q96F44 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 AC114812.1-204ENST00000449669 728 ntBASIC16.02■□□□□ 0.16
TRIM11Q96F44 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 CYMP-203ENST00000474680 1263 ntBASIC16.02■□□□□ 0.16
TRIM11Q96F44 AC022616.1-201ENST00000518688 554 ntBASIC16.02■□□□□ 0.16
TRIM11Q96F44 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
TRIM11Q96F44 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC16.02■□□□□ 0.16
TRIM11Q96F44 AC023090.2-201ENST00000625182 2110 ntBASIC16.02■□□□□ 0.16
TRIM11Q96F44 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM11Q96F44 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.15
TRIM11Q96F44 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM11Q96F44 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM11Q96F44 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM11Q96F44 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM11Q96F44 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM11Q96F44 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.02■□□□□ 0.15
TRIM11Q96F44 KRT8P22-201ENST00000562317 1415 ntBASIC16.02■□□□□ 0.15
TRIM11Q96F44 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC16.02■□□□□ 0.15
TRIM11Q96F44 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRIM11Q96F44 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 TPT1P11-201ENST00000458482 498 ntBASIC16.01■□□□□ 0.15
TRIM11Q96F44 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 DUX4L47-201ENST00000566374 394 ntBASIC16.01■□□□□ 0.15
TRIM11Q96F44 AC124283.3-201ENST00000570869 594 ntBASIC16.01■□□□□ 0.15
TRIM11Q96F44 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
TRIM11Q96F44 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRIM11Q96F44 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms