Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.5□□□□□ -0.25
RFT1Q96AA3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RFT1Q96AA3 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 ALG1L8P-201ENST00000533887 760 ntBASIC13.49□□□□□ -0.25
RFT1Q96AA3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 AC105021.1-202ENST00000570572 669 ntBASIC13.49□□□□□ -0.25
RFT1Q96AA3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 AC055717.3-201ENST00000622967 595 ntBASIC13.49□□□□□ -0.25
RFT1Q96AA3 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 AC105339.1-204ENST00000636249 355 ntBASIC13.49□□□□□ -0.25
RFT1Q96AA3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
RFT1Q96AA3 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RFT1Q96AA3 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 DGCR9-201ENST00000609630 2415 ntBASIC13.48□□□□□ -0.25
RFT1Q96AA3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AC005829.1-201ENST00000570002 483 ntBASIC13.48□□□□□ -0.25
RFT1Q96AA3 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RFT1Q96AA3 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.48□□□□□ -0.25
RFT1Q96AA3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms