Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC12.91□□□□□ -0.34
USP9XQ93008 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.91□□□□□ -0.34
USP9XQ93008 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC12.91□□□□□ -0.34
USP9XQ93008 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 AC063952.3-201ENST00000467756 308 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 AC007952.4-201ENST00000573866 637 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
USP9XQ93008 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
USP9XQ93008 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
USP9XQ93008 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
USP9XQ93008 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
USP9XQ93008 THYN1-203ENST00000392594 943 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 CASP2-203ENST00000392925 616 ntTSL 3 BASIC12.91□□□□□ -0.34
USP9XQ93008 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 FAM197Y6-201ENST00000420524 766 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 OR2R1P-201ENST00000441404 914 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 BPIFB5P-201ENST00000457066 1099 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 USB1-205ENST00000561743 1135 ntTSL 3 BASIC12.91□□□□□ -0.34
USP9XQ93008 MED11-202ENST00000573708 802 ntTSL 2 BASIC12.91□□□□□ -0.34
USP9XQ93008 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC12.91□□□□□ -0.34
USP9XQ93008 NAV1-210ENST00000593583 726 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.91□□□□□ -0.34
USP9XQ93008 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
USP9XQ93008 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC12.91□□□□□ -0.34
USP9XQ93008 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.91□□□□□ -0.34
USP9XQ93008 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
USP9XQ93008 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC12.91□□□□□ -0.34
USP9XQ93008 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC12.91□□□□□ -0.34
USP9XQ93008 REXO1L4P-201ENST00000605109 1937 ntBASIC12.91□□□□□ -0.34
USP9XQ93008 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
USP9XQ93008 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 RNLS-203ENST00000437752 525 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 RPL3P5-201ENST00000441645 1232 ntBASIC12.9□□□□□ -0.34
USP9XQ93008 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.9□□□□□ -0.34
USP9XQ93008 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC12.9□□□□□ -0.34
USP9XQ93008 AL022334.2-201ENST00000610000 484 ntBASIC12.9□□□□□ -0.34
USP9XQ93008 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
USP9XQ93008 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.9□□□□□ -0.34
USP9XQ93008 AC092862.1-201ENST00000541534 533 ntBASIC12.9□□□□□ -0.34
USP9XQ93008 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC12.9□□□□□ -0.34
USP9XQ93008 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
USP9XQ93008 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC12.9□□□□□ -0.34
USP9XQ93008 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
USP9XQ93008 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC12.9□□□□□ -0.34
USP9XQ93008 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms