Protein–RNA interactions for Protein: Q92772

CDKL2, Cyclin-dependent kinase-like 2, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL2Q92772 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.33■□□□□ 0.04
CDKL2Q92772 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CDKL2Q92772 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CDKL2Q92772 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 AC107890.1-201ENST00000422478 521 ntBASIC15.32■□□□□ 0.04
CDKL2Q92772 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.32■□□□□ 0.04
CDKL2Q92772 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.32■□□□□ 0.04
CDKL2Q92772 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
CDKL2Q92772 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.32■□□□□ 0.04
CDKL2Q92772 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
CDKL2Q92772 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CDKL2Q92772 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKL2Q92772 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
CDKL2Q92772 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDKL2Q92772 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKL2Q92772 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CDKL2Q92772 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKL2Q92772 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKL2Q92772 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.31■□□□□ 0.04
CDKL2Q92772 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CDKL2Q92772 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.31■□□□□ 0.04
CDKL2Q92772 AC067863.1-201ENST00000494933 530 ntBASIC15.31■□□□□ 0.04
CDKL2Q92772 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKL2Q92772 AC004449.1-201ENST00000564240 433 ntBASIC15.31■□□□□ 0.04
CDKL2Q92772 AC092337.1-201ENST00000568699 1129 ntBASIC15.31■□□□□ 0.04
CDKL2Q92772 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.31■□□□□ 0.04
CDKL2Q92772 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CDKL2Q92772 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.31■□□□□ 0.04
CDKL2Q92772 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CDKL2Q92772 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms