Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL844908.2-201ENST00000609461 460 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 AL391069.4-201ENST00000609583 481 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 AL596442.2-201ENST00000610240 980 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TEX48-202ENST00000612244 662 ntTSL 3 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SLC44A1Q8WWI5 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AL139400.1-201ENST00000366220 510 ntBASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 CNN2P11-201ENST00000429351 262 ntBASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 AC079781.4-201ENST00000641908 219 ntBASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.17■□□□□ 0.02
SLC44A1Q8WWI5 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
SLC44A1Q8WWI5 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms