Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CCDC107Q8WV48 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 HNRNPUP1-201ENST00000554987 333 ntBASIC13.17□□□□□ -0.3
CCDC107Q8WV48 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 AC011467.4-201ENST00000594891 528 ntBASIC13.17□□□□□ -0.3
CCDC107Q8WV48 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 AC004835.2-201ENST00000603762 682 ntBASIC13.17□□□□□ -0.3
CCDC107Q8WV48 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 AC152010.1-201ENST00000415779 2006 ntBASIC13.17□□□□□ -0.3
CCDC107Q8WV48 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.17□□□□□ -0.3
CCDC107Q8WV48 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
CCDC107Q8WV48 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms