Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TRAF3IP1Q8TDR0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 AC232323.1-201ENST00000540724 2099 ntBASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 REXO1L5P-201ENST00000622260 2098 ntBASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.83■□□□□ 0.13
TRAF3IP1Q8TDR0 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 VDAC1P7-201ENST00000462417 847 ntBASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 RRP7BP-205ENST00000566851 833 ntBASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 AL136379.1-201ENST00000623471 2642 ntBASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TRAF3IP1Q8TDR0 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 GNAQP1-201ENST00000444815 1067 ntBASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 GAPDHP40-201ENST00000505218 1006 ntBASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 AC093004.1-201ENST00000508850 424 ntBASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 AC055876.2-201ENST00000531834 546 ntBASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 AC004790.1-201ENST00000612686 536 ntBASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAF3IP1Q8TDR0 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms