Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 AL691432.3-201ENST00000621860 400 ntBASIC13.16□□□□□ -0.3
BEST4Q8NFU0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.16□□□□□ -0.3
BEST4Q8NFU0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC13.16□□□□□ -0.3
BEST4Q8NFU0 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 AL031595.1-201ENST00000623969 4709 ntBASIC13.15□□□□□ -0.3
BEST4Q8NFU0 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 KRT18P56-201ENST00000507275 550 ntBASIC13.15□□□□□ -0.3
BEST4Q8NFU0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 PDPK2P-202ENST00000562415 1191 ntBASIC13.15□□□□□ -0.3
BEST4Q8NFU0 AP001005.1-201ENST00000571755 1248 ntBASIC13.15□□□□□ -0.3
BEST4Q8NFU0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 DMBT1P1-203ENST00000636837 4628 ntBASIC13.15□□□□□ -0.3
BEST4Q8NFU0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 AC084364.1-201ENST00000551967 1556 ntBASIC13.15□□□□□ -0.3
BEST4Q8NFU0 AL607033.1-201ENST00000623900 1599 ntBASIC13.15□□□□□ -0.3
BEST4Q8NFU0 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
BEST4Q8NFU0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
BEST4Q8NFU0 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.15□□□□□ -0.31
BEST4Q8NFU0 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.15□□□□□ -0.31
BEST4Q8NFU0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
BEST4Q8NFU0 SPHK2-206ENST00000598088 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 AC004870.1-201ENST00000315132 882 ntBASIC13.14□□□□□ -0.31
BEST4Q8NFU0 HLA-H-201ENST00000383620 1096 ntBASIC13.14□□□□□ -0.31
BEST4Q8NFU0 AC136604.1-201ENST00000418535 575 ntBASIC13.14□□□□□ -0.31
BEST4Q8NFU0 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 AC023090.2-201ENST00000625182 2110 ntBASIC13.14□□□□□ -0.31
BEST4Q8NFU0 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
BEST4Q8NFU0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms