Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC092933.1-201ENST00000393644 945 ntBASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 FAM21FP-201ENST00000426241 1131 ntBASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC009486.1-201ENST00000569860 813 ntBASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 AC005252.2-201ENST00000624630 1141 ntBASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
CCDC33Q8N5R6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 AP000845.1-201ENST00000581677 2131 ntBASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 AC106760.1-201ENST00000508690 800 ntBASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 AC244669.2-201ENST00000612320 853 ntBASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
CCDC33Q8N5R6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
CCDC33Q8N5R6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.91■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms