Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 RPL35P9-201ENST00000446059 350 ntBASIC20.29■□□□□ 0.84
XRN1Q8IZH2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 TRMT112P3-201ENST00000580149 358 ntBASIC20.29■□□□□ 0.84
XRN1Q8IZH2 PCDHGB8P-201ENST00000502926 1973 ntBASIC20.29■□□□□ 0.84
XRN1Q8IZH2 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 AC006372.4-201ENST00000624122 1543 ntBASIC20.29■□□□□ 0.84
XRN1Q8IZH2 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.29■□□□□ 0.84
XRN1Q8IZH2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 SCARNA12-201ENST00000459155 270 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 RN7SL23P-201ENST00000484055 275 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 HMGB1P24-201ENST00000611897 328 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FAM90A21P-201ENST00000510875 1396 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FAM90A15P-201ENST00000514465 1395 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FAM90A6P-201ENST00000515148 1394 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FAM90A16P-201ENST00000526662 1395 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FAM90A9P-201ENST00000527940 1395 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FAM90A5P-201ENST00000528738 1395 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FAM90A14P-201ENST00000530386 1395 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FAM90A13P-201ENST00000534703 1395 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 CTBP2P8-201ENST00000422584 1330 ntBASIC20.28■□□□□ 0.84
XRN1Q8IZH2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
XRN1Q8IZH2 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 RNVU1-8-201ENST00000364272 125 ntBASIC20.27■□□□□ 0.84
XRN1Q8IZH2 NME4-203ENST00000397722 1232 ntTSL 2 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 AC098934.1-203ENST00000442868 1262 ntBASIC20.27■□□□□ 0.84
XRN1Q8IZH2 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 AL133467.4-201ENST00000602953 725 ntBASIC20.27■□□□□ 0.84
XRN1Q8IZH2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
XRN1Q8IZH2 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 AC018638.5-201ENST00000450885 754 ntBASIC20.27■□□□□ 0.83
XRN1Q8IZH2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC20.27■□□□□ 0.83
XRN1Q8IZH2 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.27■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms