Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC007191.1-201ENST00000623179 2995 ntBASIC10.14□□□□□ -0.79
SCXQ7RTU7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.14□□□□□ -0.79
SCXQ7RTU7 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
SCXQ7RTU7 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 TTTY23B-201ENST00000442790 549 ntBASIC10.13□□□□□ -0.79
SCXQ7RTU7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 ELK1P1-201ENST00000485699 580 ntBASIC10.13□□□□□ -0.79
SCXQ7RTU7 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 AC092337.1-201ENST00000568699 1129 ntBASIC10.13□□□□□ -0.79
SCXQ7RTU7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 MIR6752-201ENST00000618442 71 ntBASIC10.13□□□□□ -0.79
SCXQ7RTU7 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
SCXQ7RTU7 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
SCXQ7RTU7 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.12□□□□□ -0.79
SCXQ7RTU7 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
SCXQ7RTU7 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 PGF-202ENST00000405431 666 ntTSL 5 BASIC10.12□□□□□ -0.79
SCXQ7RTU7 HIST3H2BA-201ENST00000436555 524 ntBASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms