Protein–RNA interactions for Protein: Q71RC9

SMIM5, Small integral membrane protein 5, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM5Q71RC9 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 AC090502.4-201ENST00000551714 1386 ntBASIC18.76■□□□□ 0.59
SMIM5Q71RC9 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SMIM5Q71RC9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 HLA-DQB1-202ENST00000399079 1501 ntBASIC18.75■□□□□ 0.59
SMIM5Q71RC9 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 MT3-203ENST00000565838 421 ntTSL 3 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 AC009560.1-201ENST00000620208 434 ntBASIC18.75■□□□□ 0.59
SMIM5Q71RC9 AP001184.1-201ENST00000637936 376 ntBASIC18.75■□□□□ 0.59
SMIM5Q71RC9 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.75■□□□□ 0.59
SMIM5Q71RC9 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 PKD1P1-201ENST00000458669 6805 ntBASIC18.74■□□□□ 0.59
SMIM5Q71RC9 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 SALL4P5-201ENST00000419001 1760 ntBASIC18.74■□□□□ 0.59
SMIM5Q71RC9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 LILRP1-201ENST00000444199 1370 ntBASIC18.74■□□□□ 0.59
SMIM5Q71RC9 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 DUTP3-201ENST00000450025 415 ntBASIC18.74■□□□□ 0.59
SMIM5Q71RC9 FTH1P22-201ENST00000456305 520 ntBASIC18.74■□□□□ 0.59
SMIM5Q71RC9 CHCHD2P9-201ENST00000461726 456 ntBASIC18.74■□□□□ 0.59
SMIM5Q71RC9 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 LINC00634-202ENST00000505157 222 ntBASIC18.74■□□□□ 0.59
SMIM5Q71RC9 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SMIM5Q71RC9 KRT18P9-201ENST00000604826 1300 ntBASIC18.74■□□□□ 0.59
SMIM5Q71RC9 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SMIM5Q71RC9 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms