Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 MX1-218ENST00000619682 1980 ntTSL 5 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
ANKRD55Q3KP44 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 AL354702.1-201ENST00000442006 1960 ntBASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 LILRP1-201ENST00000444199 1370 ntBASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 YBX2P1-201ENST00000394192 760 ntBASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 UPF3AP3-201ENST00000420996 769 ntBASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 MKNK2P1-201ENST00000437526 628 ntBASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 MAX-210ENST00000555419 765 ntTSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 AL135744.1-201ENST00000565098 629 ntBASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 AC005829.1-201ENST00000570002 483 ntBASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ANKRD55Q3KP44 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.61□□□□□ -0.39
ANKRD55Q3KP44 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms