Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 KRT8P22-201ENST00000562317 1415 ntBASIC13.66□□□□□ -0.22
CDK5Q00535 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CDK5Q00535 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CDK5Q00535 AL645937.2-201ENST00000396808 931 ntBASIC13.66□□□□□ -0.22
CDK5Q00535 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.66□□□□□ -0.22
CDK5Q00535 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.66□□□□□ -0.22
CDK5Q00535 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CDK5Q00535 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.66□□□□□ -0.22
CDK5Q00535 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.66□□□□□ -0.22
CDK5Q00535 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CDK5Q00535 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
CDK5Q00535 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.66□□□□□ -0.22
CDK5Q00535 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 INE2-201ENST00000630399 1874 ntBASIC13.65□□□□□ -0.22
CDK5Q00535 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDK5Q00535 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 AL158070.2-201ENST00000623713 1621 ntBASIC13.65□□□□□ -0.22
CDK5Q00535 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.65□□□□□ -0.22
CDK5Q00535 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.65□□□□□ -0.22
CDK5Q00535 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.65□□□□□ -0.22
CDK5Q00535 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 AL671883.3-201ENST00000603274 991 ntBASIC13.65□□□□□ -0.22
CDK5Q00535 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.65□□□□□ -0.22
CDK5Q00535 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.65□□□□□ -0.22
CDK5Q00535 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.65□□□□□ -0.22
CDK5Q00535 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CDK5Q00535 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CDK5Q00535 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CDK5Q00535 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDK5Q00535 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDK5Q00535 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CDK5Q00535 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CDK5Q00535 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CDK5Q00535 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDK5Q00535 KRT8P14-201ENST00000414254 1442 ntBASIC13.64□□□□□ -0.23
CDK5Q00535 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CDK5Q00535 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms