Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.12□□□□□ -0.15
PER3P56645 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 C2orf27AP3-201ENST00000434123 579 ntBASIC14.12□□□□□ -0.15
PER3P56645 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 RN7SL560P-201ENST00000577943 264 ntBASIC14.12□□□□□ -0.15
PER3P56645 RN7SL190P-201ENST00000582519 257 ntBASIC14.12□□□□□ -0.15
PER3P56645 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.12□□□□□ -0.15
PER3P56645 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 LINC01115-203ENST00000606068 577 ntBASIC14.12□□□□□ -0.15
PER3P56645 AL354718.3-201ENST00000616414 581 ntBASIC14.12□□□□□ -0.15
PER3P56645 CR382287.1-201ENST00000623954 586 ntBASIC14.12□□□□□ -0.15
PER3P56645 RHOXF1P1-202ENST00000635473 501 ntBASIC14.12□□□□□ -0.15
PER3P56645 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.12□□□□□ -0.15
PER3P56645 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.12□□□□□ -0.15
PER3P56645 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
PER3P56645 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PER3P56645 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.12□□□□□ -0.15
PER3P56645 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.12□□□□□ -0.15
PER3P56645 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PER3P56645 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.12□□□□□ -0.15
PER3P56645 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PER3P56645 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.11□□□□□ -0.15
PER3P56645 AL359183.1-201ENST00000623796 2132 ntBASIC14.11□□□□□ -0.15
PER3P56645 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PER3P56645 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 BAATP1-201ENST00000412284 1225 ntBASIC14.11□□□□□ -0.15
PER3P56645 EEF1DP4-201ENST00000446006 880 ntBASIC14.11□□□□□ -0.15
PER3P56645 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC14.11□□□□□ -0.15
PER3P56645 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.11□□□□□ -0.15
PER3P56645 RIT1-205ENST00000539040 919 ntTSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 AC023310.1-201ENST00000554836 735 ntBASIC14.11□□□□□ -0.15
PER3P56645 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.11□□□□□ -0.15
PER3P56645 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.11□□□□□ -0.15
PER3P56645 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.11□□□□□ -0.15
PER3P56645 AL450472.2-201ENST00000603663 1156 ntBASIC14.11□□□□□ -0.15
PER3P56645 AL022328.3-201ENST00000607943 679 ntBASIC14.11□□□□□ -0.15
PER3P56645 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.11□□□□□ -0.15
PER3P56645 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.11□□□□□ -0.15
PER3P56645 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.11□□□□□ -0.15
PER3P56645 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC14.11□□□□□ -0.15
PER3P56645 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
PER3P56645 REXO1L1P-202ENST00000608646 1974 ntBASIC14.11□□□□□ -0.15
PER3P56645 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.11□□□□□ -0.15
PER3P56645 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PER3P56645 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms