Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHB4P54760 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
EPHB4P54760 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
EPHB4P54760 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHB4P54760 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHB4P54760 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
EPHB4P54760 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC17.05■□□□□ 0.32
EPHB4P54760 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
EPHB4P54760 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.04■□□□□ 0.32
EPHB4P54760 HSPB1P2-201ENST00000448722 546 ntBASIC17.04■□□□□ 0.32
EPHB4P54760 SPTLC1P5-201ENST00000450718 252 ntBASIC17.04■□□□□ 0.32
EPHB4P54760 AC245100.5-201ENST00000452108 331 ntBASIC17.04■□□□□ 0.32
EPHB4P54760 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 AP001505.2-201ENST00000616815 443 ntBASIC17.04■□□□□ 0.32
EPHB4P54760 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.04■□□□□ 0.32
EPHB4P54760 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 AL592424.1-201ENST00000563624 1536 ntBASIC17.04■□□□□ 0.32
EPHB4P54760 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC17.04■□□□□ 0.32
EPHB4P54760 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
EPHB4P54760 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.04■□□□□ 0.32
EPHB4P54760 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
EPHB4P54760 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.03■□□□□ 0.32
EPHB4P54760 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.03■□□□□ 0.32
EPHB4P54760 RPL17P11-201ENST00000417593 544 ntBASIC17.03■□□□□ 0.32
EPHB4P54760 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC17.03■□□□□ 0.32
EPHB4P54760 NKAIN1P1-201ENST00000435754 582 ntBASIC17.03■□□□□ 0.32
EPHB4P54760 POM121L10P-201ENST00000436994 1285 ntBASIC17.03■□□□□ 0.32
EPHB4P54760 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.03■□□□□ 0.32
EPHB4P54760 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
EPHB4P54760 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
EPHB4P54760 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
EPHB4P54760 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.03■□□□□ 0.32
EPHB4P54760 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.03■□□□□ 0.32
EPHB4P54760 AC097359.3-201ENST00000603982 1210 ntBASIC17.03■□□□□ 0.32
EPHB4P54760 ECM1P1-201ENST00000604092 1279 ntBASIC17.03■□□□□ 0.32
EPHB4P54760 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.03■□□□□ 0.32
EPHB4P54760 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC17.03■□□□□ 0.32
EPHB4P54760 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.03■□□□□ 0.32
EPHB4P54760 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
EPHB4P54760 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.03■□□□□ 0.32
EPHB4P54760 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
EPHB4P54760 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
EPHB4P54760 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.02■□□□□ 0.32
EPHB4P54760 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
EPHB4P54760 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
EPHB4P54760 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
EPHB4P54760 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms