Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 RHOXF1P1-202ENST00000635473 501 ntBASIC15.57■□□□□ 0.08
ATXN3P54252 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
ATXN3P54252 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 AL691432.1-201ENST00000596308 1422 ntBASIC15.57■□□□□ 0.08
ATXN3P54252 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ATXN3P54252 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ATXN3P54252 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
ATXN3P54252 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
ATXN3P54252 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.57■□□□□ 0.08
ATXN3P54252 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
ATXN3P54252 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATXN3P54252 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
ATXN3P54252 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.56■□□□□ 0.08
ATXN3P54252 KRT8P13-201ENST00000463294 1010 ntBASIC15.56■□□□□ 0.08
ATXN3P54252 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.56■□□□□ 0.08
ATXN3P54252 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATXN3P54252 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.56■□□□□ 0.08
ATXN3P54252 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.56■□□□□ 0.08
ATXN3P54252 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.56■□□□□ 0.08
ATXN3P54252 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.56■□□□□ 0.08
ATXN3P54252 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.56■□□□□ 0.08
ATXN3P54252 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.56■□□□□ 0.08
ATXN3P54252 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
ATXN3P54252 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
ATXN3P54252 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
ATXN3P54252 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
ATXN3P54252 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
ATXN3P54252 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
ATXN3P54252 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
ATXN3P54252 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.55■□□□□ 0.08
ATXN3P54252 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
ATXN3P54252 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
ATXN3P54252 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.55■□□□□ 0.08
ATXN3P54252 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.55■□□□□ 0.08
ATXN3P54252 AC012441.1-201ENST00000446669 685 ntBASIC15.55■□□□□ 0.08
ATXN3P54252 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.55■□□□□ 0.08
ATXN3P54252 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 AC023310.1-201ENST00000554836 735 ntBASIC15.55■□□□□ 0.08
ATXN3P54252 AC124283.3-201ENST00000570869 594 ntBASIC15.55■□□□□ 0.08
ATXN3P54252 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.55■□□□□ 0.08
ATXN3P54252 AL118558.3-201ENST00000607414 1079 ntBASIC15.55■□□□□ 0.08
ATXN3P54252 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
ATXN3P54252 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
ATXN3P54252 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
ATXN3P54252 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms