Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
CLCN3P51790 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
CLCN3P51790 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
CLCN3P51790 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.52■□□□□ 0.24
CLCN3P51790 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.52■□□□□ 0.24
CLCN3P51790 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.52■□□□□ 0.24
CLCN3P51790 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN3P51790 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.52■□□□□ 0.24
CLCN3P51790 AC044849.1-201ENST00000519737 1188 ntBASIC16.52■□□□□ 0.24
CLCN3P51790 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.52■□□□□ 0.24
CLCN3P51790 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN3P51790 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN3P51790 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN3P51790 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CLCN3P51790 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN3P51790 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
CLCN3P51790 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN3P51790 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.52■□□□□ 0.23
CLCN3P51790 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN3P51790 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN3P51790 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CLCN3P51790 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLCN3P51790 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC16.51■□□□□ 0.23
CLCN3P51790 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN3P51790 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CLCN3P51790 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLCN3P51790 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 FNTAP2-201ENST00000430308 634 ntBASIC16.51■□□□□ 0.23
CLCN3P51790 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCN3P51790 NKAIN1P1-201ENST00000435754 582 ntBASIC16.51■□□□□ 0.23
CLCN3P51790 AKR7A2P1-201ENST00000460134 915 ntBASIC16.51■□□□□ 0.23
CLCN3P51790 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCN3P51790 ACTG1P17-201ENST00000558391 1119 ntBASIC16.51■□□□□ 0.23
CLCN3P51790 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.51■□□□□ 0.23
CLCN3P51790 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN3P51790 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CLCN3P51790 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCN3P51790 AC020914.3-201ENST00000594712 304 ntBASIC16.51■□□□□ 0.23
CLCN3P51790 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCN3P51790 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCN3P51790 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CLCN3P51790 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 E2F3P2-201ENST00000447755 1422 ntBASIC16.51■□□□□ 0.23
CLCN3P51790 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLCN3P51790 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN3P51790 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN3P51790 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN3P51790 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CLCN3P51790 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 FER1L4-210ENST00000615531 5998 ntBASIC16.5■□□□□ 0.23
CLCN3P51790 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLCN3P51790 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCN3P51790 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CLCN3P51790 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CLCN3P51790 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN3P51790 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCN3P51790 CALR4P-201ENST00000431943 946 ntBASIC16.5■□□□□ 0.23
CLCN3P51790 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms