Protein–RNA interactions for Protein: P51571

SSR4, Translocon-associated protein subunit delta, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P51571 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR4P51571 AL109954.1-202ENST00000564051 2148 ntBASIC13.85□□□□□ -0.19
SSR4P51571 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC13.85□□□□□ -0.19
SSR4P51571 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR4P51571 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
SSR4P51571 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.85□□□□□ -0.19
SSR4P51571 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
SSR4P51571 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.84□□□□□ -0.19
SSR4P51571 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
SSR4P51571 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.84□□□□□ -0.19
SSR4P51571 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
SSR4P51571 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 MTX1P1-201ENST00000440904 838 ntBASIC13.84□□□□□ -0.19
SSR4P51571 FAM86HP-204ENST00000513466 959 ntBASIC13.84□□□□□ -0.19
SSR4P51571 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.84□□□□□ -0.19
SSR4P51571 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
SSR4P51571 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.84□□□□□ -0.19
SSR4P51571 AC073413.1-201ENST00000603927 732 ntBASIC13.84□□□□□ -0.19
SSR4P51571 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
SSR4P51571 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 KRT8P4-201ENST00000509735 1454 ntBASIC13.84□□□□□ -0.19
SSR4P51571 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.84□□□□□ -0.19
SSR4P51571 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 AC015818.8-201ENST00000587907 1519 ntBASIC13.84□□□□□ -0.19
SSR4P51571 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SSR4P51571 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SSR4P51571 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSR4P51571 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SSR4P51571 OR2I1P-209ENST00000641730 5365 ntBASIC13.83□□□□□ -0.19
SSR4P51571 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SSR4P51571 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.83□□□□□ -0.2
SSR4P51571 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SSR4P51571 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SSR4P51571 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.83□□□□□ -0.2
SSR4P51571 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 MIR326-201ENST00000362220 95 ntBASIC13.83□□□□□ -0.2
SSR4P51571 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
SSR4P51571 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SSR4P51571 AC079178.1-201ENST00000420915 656 ntBASIC13.83□□□□□ -0.2
SSR4P51571 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.83□□□□□ -0.2
SSR4P51571 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
SSR4P51571 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.83□□□□□ -0.2
SSR4P51571 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.83□□□□□ -0.2
SSR4P51571 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.83□□□□□ -0.2
SSR4P51571 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.83□□□□□ -0.2
SSR4P51571 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.83□□□□□ -0.2
SSR4P51571 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SSR4P51571 AC073347.1-201ENST00000421633 2643 ntBASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms