Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 WFDC1-204ENST00000613603 549 ntBASIC13.51□□□□□ -0.25
CSNK1A1P48729 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 CU634019.7-201ENST00000624153 1185 ntBASIC13.51□□□□□ -0.25
CSNK1A1P48729 FP236241.2-201ENST00000624906 1185 ntBASIC13.51□□□□□ -0.25
CSNK1A1P48729 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.51□□□□□ -0.25
CSNK1A1P48729 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CSNK1A1P48729 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 FGD5P1-202ENST00000614866 2498 ntBASIC13.5□□□□□ -0.25
CSNK1A1P48729 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 AL139094.1-201ENST00000405549 1188 ntBASIC13.5□□□□□ -0.25
CSNK1A1P48729 HLA-K-203ENST00000430151 1046 ntBASIC13.5□□□□□ -0.25
CSNK1A1P48729 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 AC027307.3-201ENST00000594262 1100 ntBASIC13.5□□□□□ -0.25
CSNK1A1P48729 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CSNK1A1P48729 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CSNK1A1P48729 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.49□□□□□ -0.25
CSNK1A1P48729 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSNK1A1P48729 RNU1-114P-201ENST00000365297 166 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms