Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 ACE3P-201ENST00000423435 1973 ntBASIC14.18□□□□□ -0.14
NR4A1P22736 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
NR4A1P22736 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 RPL30-202ENST00000396070 440 ntTSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 PP14571-201ENST00000404327 934 ntTSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 PMS2P2-201ENST00000425039 1128 ntBASIC14.18□□□□□ -0.14
NR4A1P22736 AC142381.1-201ENST00000426099 345 ntBASIC14.18□□□□□ -0.14
NR4A1P22736 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.18□□□□□ -0.14
NR4A1P22736 RBPMS2P1-201ENST00000437762 623 ntBASIC14.18□□□□□ -0.14
NR4A1P22736 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.18□□□□□ -0.14
NR4A1P22736 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 AC025678.2-201ENST00000562061 970 ntBASIC14.18□□□□□ -0.14
NR4A1P22736 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.18□□□□□ -0.14
NR4A1P22736 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.18□□□□□ -0.14
NR4A1P22736 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
NR4A1P22736 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NR4A1P22736 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 AC018529.2-202ENST00000611482 3087 ntBASIC14.18□□□□□ -0.14
NR4A1P22736 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
NR4A1P22736 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
NR4A1P22736 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NR4A1P22736 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.18□□□□□ -0.14
NR4A1P22736 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.18□□□□□ -0.14
NR4A1P22736 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 PPT1-213ENST00000641319 2388 ntBASIC14.17□□□□□ -0.14
NR4A1P22736 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.17□□□□□ -0.14
NR4A1P22736 GPS2P2-201ENST00000430745 888 ntBASIC14.17□□□□□ -0.14
NR4A1P22736 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 MIR4313-201ENST00000580760 101 ntBASIC14.17□□□□□ -0.14
NR4A1P22736 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.17□□□□□ -0.14
NR4A1P22736 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
NR4A1P22736 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NR4A1P22736 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
NR4A1P22736 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms