Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KCNA3P22001 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
KCNA3P22001 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNA3P22001 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNA3P22001 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC18.16■□□□□ 0.5
KCNA3P22001 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
KCNA3P22001 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNA3P22001 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
KCNA3P22001 AC007250.1-201ENST00000608934 338 ntBASIC18.16■□□□□ 0.5
KCNA3P22001 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.16■□□□□ 0.5
KCNA3P22001 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
KCNA3P22001 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC18.16■□□□□ 0.5
KCNA3P22001 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.16■□□□□ 0.5
KCNA3P22001 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
KCNA3P22001 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA3P22001 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.15■□□□□ 0.5
KCNA3P22001 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA3P22001 AC012508.2-201ENST00000567613 1472 ntBASIC18.15■□□□□ 0.5
KCNA3P22001 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA3P22001 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC18.15■□□□□ 0.5
KCNA3P22001 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC18.15■□□□□ 0.5
KCNA3P22001 RPL35P9-201ENST00000446059 350 ntBASIC18.15■□□□□ 0.5
KCNA3P22001 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.15■□□□□ 0.5
KCNA3P22001 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA3P22001 AC131206.1-201ENST00000538078 1211 ntBASIC18.15■□□□□ 0.5
KCNA3P22001 VPS18-202ENST00000558474 873 ntTSL 3 BASIC18.15■□□□□ 0.5
KCNA3P22001 HERC2P11-201ENST00000562845 725 ntBASIC18.15■□□□□ 0.5
KCNA3P22001 AC100756.2-201ENST00000569537 736 ntBASIC18.15■□□□□ 0.5
KCNA3P22001 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC18.15■□□□□ 0.5
KCNA3P22001 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.15■□□□□ 0.5
KCNA3P22001 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
KCNA3P22001 AHCYP4-201ENST00000419201 1315 ntBASIC18.15■□□□□ 0.5
KCNA3P22001 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC18.15■□□□□ 0.5
KCNA3P22001 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
KCNA3P22001 AC008894.3-201ENST00000624324 3103 ntBASIC18.15■□□□□ 0.5
KCNA3P22001 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
KCNA3P22001 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
KCNA3P22001 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.15■□□□□ 0.5
KCNA3P22001 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
KCNA3P22001 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KCNA3P22001 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC18.14■□□□□ 0.5
KCNA3P22001 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KCNA3P22001 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
KCNA3P22001 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
KCNA3P22001 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.14■□□□□ 0.49
KCNA3P22001 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC18.14■□□□□ 0.49
KCNA3P22001 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC18.14■□□□□ 0.49
KCNA3P22001 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
KCNA3P22001 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 KRT17P5-201ENST00000332088 839 ntBASIC18.14■□□□□ 0.49
KCNA3P22001 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
KCNA3P22001 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
KCNA3P22001 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC18.14■□□□□ 0.49
KCNA3P22001 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.14■□□□□ 0.49
KCNA3P22001 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
KCNA3P22001 PGAM1P12-201ENST00000505622 748 ntBASIC18.14■□□□□ 0.49
KCNA3P22001 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.14■□□□□ 0.49
KCNA3P22001 AC068867.1-201ENST00000559855 150 ntBASIC18.14■□□□□ 0.49
KCNA3P22001 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC18.14■□□□□ 0.49
KCNA3P22001 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC18.14■□□□□ 0.49
KCNA3P22001 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
KCNA3P22001 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.14■□□□□ 0.49
KCNA3P22001 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.14■□□□□ 0.49
KCNA3P22001 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms