Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.27■□□□□ 0.2
CD58P19256 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16.27■□□□□ 0.2
CD58P19256 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.27■□□□□ 0.2
CD58P19256 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16.27■□□□□ 0.2
CD58P19256 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC16.27■□□□□ 0.2
CD58P19256 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
CD58P19256 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.27■□□□□ 0.2
CD58P19256 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.27■□□□□ 0.2
CD58P19256 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.27■□□□□ 0.2
CD58P19256 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 AC012441.1-201ENST00000446669 685 ntBASIC16.27■□□□□ 0.2
CD58P19256 GIMAP3P-201ENST00000495150 836 ntBASIC16.27■□□□□ 0.2
CD58P19256 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.27■□□□□ 0.2
CD58P19256 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.27■□□□□ 0.2
CD58P19256 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CD58P19256 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CD58P19256 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.27■□□□□ 0.19
CD58P19256 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD58P19256 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
CD58P19256 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CD58P19256 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD58P19256 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD58P19256 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CD58P19256 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CD58P19256 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.26■□□□□ 0.19
CD58P19256 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 RPS15-201ENST00000233609 534 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CD58P19256 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.26■□□□□ 0.19
CD58P19256 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 BCRP2-202ENST00000447763 634 ntBASIC16.26■□□□□ 0.19
CD58P19256 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 AC106760.1-201ENST00000508690 800 ntBASIC16.26■□□□□ 0.19
CD58P19256 BCRP6-201ENST00000510112 632 ntBASIC16.26■□□□□ 0.19
CD58P19256 BCRP7-201ENST00000511549 544 ntBASIC16.26■□□□□ 0.19
CD58P19256 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 AL035252.4-201ENST00000624174 288 ntBASIC16.26■□□□□ 0.19
CD58P19256 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CD58P19256 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CD58P19256 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CD58P19256 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CD58P19256 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.26■□□□□ 0.19
CD58P19256 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms